Agent Conversation: deepseek-reasoner

Model: deepseek-reasoner
Total steps: 6
Messages: 13
UserStep 0

Task: ts-classification

Time Series Classification: Custom Model Design

Objective

Design and implement a custom deep learning model for multivariate time series classification. Your code goes in the Model class in models/Custom.py. Three reference implementations (DLinear, TimesNet, PatchTST) are provided as read-only.

Evaluation

Trained and evaluated on three UEA datasets:

  • EthanolConcentration — spectral data classification
  • FaceDetection — MEG brain imaging classification
  • Handwriting — accelerometer-based character recognition

Training uses RAdam optimizer, CrossEntropyLoss, patience=10. Metric: accuracy (higher is better).

Time-Series-Library/models/Custom.py [EDITABLE — entire file only]

     1: import torch
     2: import torch.nn as nn
     3: import torch.nn.functional as F
     4: 
     5: 
     6: class Model(nn.Module):
     7:     """
     8:     Custom model for time series classification.
     9: 
    10:     Forward signature: forward(x_enc, x_mark_enc, x_dec, x_mark_dec, mask=None)
    11:     - x_enc: [batch, seq_len, enc_in] — input time series
    12:     - x_mark_enc: [batch, seq_len] — padding mask (1=valid, 0=padding)
    13:     - x_dec: not used (None)
    14:     - x_mark_dec: not used (None)
    15: 
    16:     Must return: [batch, num_class] — class logits (before softmax)
    17: 
    18:     Note: configs.seq_len, configs.enc_in, and configs.num_class are set
    19:     dynamically from the dataset at runtime.
    20:     """
    21: 
    22:     def __init__(self, configs):
    23:         super(Model, self).__init__()
    24:         self.task_name = configs.task_name
    25:         self.seq_len = configs.seq_len
    26:         self.enc_in = configs.enc_in
    27:         self.num_class = configs.num_class
    28:         # TODO: Define your model architecture here
    29: 
    30:     def classification(self, x_enc, x_mark_enc):
    31:         """
    32:         Classification: assign a label to the input time series.
    33:         Input: x_enc [batch, seq_len, enc_in]
    34:         x_mark_enc: [batch, seq_len] padding mask
    35:         Output: [batch, num_class] logits
    36:         """
    37:         # TODO: Implement your classification logic
    38:         batch_size = x_enc.shape[0]
    39:         return torch.zeros(batch_size, self.num_class).to(x_enc.device)
    40: 
    41:     def forward(self, x_enc, x_mark_enc, x_dec, x_mark_dec, mask=None):
    42:         if self.task_name == 'classification':
    43:             dec_out = self.classification(x_enc, x_mark_enc)
    44:             return dec_out
    45:         return None

Time-Series-Library/models/DLinear.py [READ-ONLY — do not edit]

     1: import torch
     2: import torch.nn as nn
     3: import torch.nn.functional as F
     4: from layers.Autoformer_EncDec import series_decomp
     5: 
     6: 
     7: class Model(nn.Module):
     8:     """
     9:     Paper l
AssistantStep 1edit
Tool Input
1{
2  "op": "replace",
3  "filename": "Time-Series-Library/models/Custom.py",
4  "start_line": 1,
5  "end_line": 45,
6  "content": "import torch\nimport torch.nn as nn\nimport torch.nn.functional as F\nimport math\n\n\nclass MultiScaleConv(nn.Module):\n    \"\"\"\n    Multi-scale 1D convolutional block with residual connection.\n    Uses parallel convs with different kernel sizes, then combines.\n    \"\"\"\n    def __init__(self, in_channels, out_channels, kernel_sizes=[3, 5, 7], dropout=0.1):\n        super(MultiScaleConv, self).__init__()\n        self.convs = nn.ModuleList()\n        for ks in kernel_sizes:\n            padding = (ks // 2)\n            self.convs.append(\n                nn.Sequential(\n                    nn.Conv1d(in_channels, out_channels, kernel_size=ks, padding=padding),\n                    nn.BatchNorm1d(out_channels),\n                    nn.GELU(),\n                    nn.Dropout(dropout)\n                )\n            )\n        # If in_channels != out_channels, need projection\n        if in_channels != out_channels:\n            self.residual_proj = nn.Conv1d(in_channels, out_channels, kernel_size=1)\n        else:\n            self.residual_proj = None\n        self.out_channels = out_channels\n        \n    def forward(self, x):\n        # x shape: [batch, channels, length]\n        residual = x\n        out = 0\n        for conv in self.convs:\n            out = out + conv(x)\n        out = out / len(self.convs)\n        if self.residual_proj is not None:\n            residual = self.residual_proj(residual)\n        # residual and out have same channels now\n        return F.gelu(out + residual)\n\n\nclass TemporalSelfAttention(nn.Module):\n    \"\"\"\n    Simple temporal self-attention without multi-head to keep params low.\n    \"\"\"\n    def __init__(self, d_model, dropout=0.1):\n        super(TemporalSelfAttention, self).__init__()\n        self.d_model = d_model\n        self.qkv = nn.Linear(d_model, d_model * 3)\n        self.dropout = nn.Dropout(dropout)\n        self.scale = 1.0 / math.sqrt(d_model)\n        \n    def forward(self, x):\n        # x shape: [batch, length, d_model]\n        B, L, D = x.shape\n        qkv = self.qkv(x).reshape(B, L, 3, D).permute(2, 0, 1, 3)  # [3, B, L, D]\n        q, k, v = qkv[0], qkv[1], qkv[2]\n        attn = torch.matmul(q, k.transpose(-2, -1)) * self.scale  # [B, L, L]\n        attn = F.softmax(attn, dim=-1)\n        attn = self.dropout(attn)\n        out = torch.matmul(attn, v)  # [B, L, D]\n        return out + x  # residual\n\n\nclass ChannelAttention(nn.Module):\n    \"\"\"\n    Channel attention across variables (squeeze-and-excitation style).\n    \"\"\"\n    def __init__(self, num_channels, reduction=4):\n        super(ChannelAttention, self).__init__()\n        self.avg_pool = nn.AdaptiveAvgPool1d(1)\n        self.fc = nn.Sequential(\n            nn.Linear(num_channels, num_channels // reduction, bias=False),\n            nn.ReLU(inplace=True),\n            nn.Linear(num_channels // reduction, num_channels, bias=False),\n            nn.Sigmoid()\n        )\n        \n    def forward(self, x):\n        # x shape: [batch, channels, length]\n        B, C, L = x.shape\n        y = self.avg_pool(x).squeeze(-1)  # [B, C]\n        y = self.fc(y).unsqueeze(-1)  # [B, C, 1]\n        return x * y.expand_as(x)\n\n\nclass Model(nn.Module):\n    \"\"\"\n    Custom model for time series classification.\n    Multi-scale convolutional encoder + temporal attention + channel attention.\n    \"\"\"\n    def __init__(self, configs):\n        super(Model, self).__init__()\n        self.task_name = configs.task_name\n        self.seq_len = configs.seq_len\n        self.enc_in = configs.enc_in\n        self.num_class = configs.num_class\n        \n        # Use config parameters if available, else defaults\n        d_model = getattr(configs, 'd_model', 128)\n        d_ff = getattr(configs, 'd_ff', 256)\n        n_heads = getattr(configs, 'n_heads', 4)\n        e_layers = getattr(configs, 'e_layers', 2)\n        dropout = getattr(configs, 'dropout', 0.1)\n        \n        # Initial projection to d_model\n        self.input_proj = nn.Linear(self.enc_in, d_model)\n        \n        # Multi-scale convolutional layers\n        self.conv_layers = nn.ModuleList()\n        for i in range(e_layers):\n            self.conv_layers.append(\n                MultiScaleConv(d_model, d_model, kernel_sizes=[3, 5, 7], dropout=dropout)\n            )\n        \n        # Temporal self-attention layer\n        self.temp_attention = TemporalSelfAttention(d_model, dropout=dropout)\n        \n        # Channel attention (applied to transposed view)\n        self.channel_attention = ChannelAttention(d_model, reduction=4)\n        \n        # Adaptive pooling\n        self.adaptive_pool = nn.AdaptiveAvgPool1d(1)\n        \n        # Classification head\n        self.dropout = nn.Dropout(dropout)\n        self.classifier = nn.Sequential(\n            nn.Linear(d_model, d_ff),\n            nn.GELU(),\n            nn.Dropout(dropout),\n            nn.Linear(d_ff, self.num_class)\n        )\n        \n    def classification(self, x_enc, x_mark_enc):\n        \"\"\"\n        Classification: assign a label to the input time series.\n        Input: x_enc [batch, seq_len, enc_in]\n        x_mark_enc: [batch, seq_len] padding mask\n        Output: [batch, num_class] logits\n        \"\"\"\n        batch_size = x_enc.shape[0]\n        \n        # Apply padding mask if provided (zero out padded positions)\n        if x_mark_enc is not None:\n            mask = x_mark_enc.unsqueeze(-1)  # [batch, seq_len, 1]\n            x_enc = x_enc * mask\n        \n        # Project input [batch, seq_len, enc_in] -> [batch, seq_len, d_model]\n        x = self.input_proj(x_enc)\n        \n        # Transpose for conv layers: [batch, d_model, seq_len]\n        x = x.transpose(1, 2)\n        \n        # Apply multi-scale convolutional layers\n        for conv in self.conv_layers:\n            x = conv(x)\n        \n        # Apply channel attention\n        x = self.channel_attention(x)\n        \n        # Transpose back for temporal attention: [batch, seq_len, d_model]\n        x = x.transpose(1, 2)\n        \n        # Apply temporal self-attention\n        x = self.temp_attention(x)\n        \n        # Apply padding mask again before pooling\n        if x_mark_enc is not None:\n            mask = x_mark_enc.unsqueeze(-1)  # [batch, seq_len, 1]\n            x = x * mask\n        \n        # Adaptive average pooling over time dimension\n        # Transpose to [batch, d_model, seq_len] for pooling\n        x = x.transpose(1, 2)\n        x = self.adaptive_pool(x)  # [batch, d_model, 1]\n        x = x.squeeze(-1)  # [batch, d_model]\n        \n        # Classification\n        x = self.dropout(x)\n        logits = self.classifier(x)\n        return logits\n\n    def forward(self, x_enc, x_mark_enc, x_dec, x_mark_dec, mask=None):\n        if self.task_name == 'classification':\n            dec_out = self.classification(x_enc, x_mark_enc)\n            return dec_out\n        return None"
7}
Tool ResultStep 1
OK: Replaced lines 1..45 with 190 line(s) in Time-Series-Library/models/Custom.py. Editable range: entire file.

[Current file: Time-Series-Library/models/Custom.py | editable: 1–190 | total: 190 lines]
     1  import torch
     2  import torch.nn as nn
     3  import torch.nn.functional as F
     4  import math
     5  
     6  
     7  class MultiScaleConv(nn.Module):
     8      """
     9      Multi-scale 1D convolutional block with residual connection.
    10      Uses parallel convs with different kernel sizes, then combines.
    11      """
    12      def __init__(self, in_channels, out_channels, kernel_sizes=[3, 5, 7], dropout=0.1):
    13          super(MultiScaleConv, self).__init__()
    14          self.convs = nn.ModuleList()
    15          for ks in kernel_sizes:
    16              padding = (ks // 2)
    17              self.convs.append(
    18                  nn.Sequential(
    19                      nn.Conv1d(in_channels, out_channels, kernel_size=ks, padding=pad
AssistantStep 2test
Tool ResultStep 2
[Test #1] (2 tests remaining; call submit(n=1) to submit this result)


## Seed 42

### EthanolConcentration (scripts/ethanol.sh)
Training metrics (last epochs):
TRAIN_METRICS epoch=9 train_loss=1.453 vali_loss=1.425 vali_acc=0.221 test_acc=0.221
TRAIN_METRICS epoch=10 train_loss=1.428 vali_loss=1.428 vali_acc=0.266 test_acc=0.266
TRAIN_METRICS epoch=11 train_loss=1.428 vali_loss=1.427 vali_acc=0.236 test_acc=0.236
TRAIN_METRICS epoch=12 train_loss=1.402 vali_loss=1.419 vali_acc=0.251 test_acc=0.251
TRAIN_METRICS epoch=13 train_loss=1.382 vali_loss=1.447 vali_acc=0.278 test_acc=0.278
Test results (EthanolConcentration):
  Accuracy: 0.28897

### FaceDetection (scripts/facedetection.sh)
Training metrics (last epochs):
TRAIN_METRICS epoch=10 train_loss=0.424 vali_loss=0.884 vali_acc=0.530 test_acc=0.530
TRAIN_METRICS epoch=11 train_loss=0.349 vali_loss=0.975 vali_acc=0.547 test_acc=0.547
TRAIN_METRICS epoch=12 train_loss=0.268 vali_loss=1.361 vali_acc=0.552 test_acc=0.552
TRAIN_METRICS ep
AssistantStep 3edit
Tool Input
1{
2  "op": "replace",
3  "filename": "Time-Series-Library/models/Custom.py",
4  "start_line": 1,
5  "end_line": 190,
6  "content": "import torch\nimport torch.nn as nn\nimport torch.nn.functional as F\nimport math\n\n\nclass DilatedConvBlock(nn.Module):\n    \"\"\"\n    Dilated convolutional block with multiple parallel dilation rates.\n    Each branch: Conv1d with dilation, BatchNorm, GELU, Dropout.\n    \"\"\"\n    def __init__(self, in_channels, out_channels, dilation_rates=[1, 2, 4, 8], kernel_size=3, dropout=0.1):\n        super(DilatedConvBlock, self).__init__()\n        self.branches = nn.ModuleList()\n        for dilation in dilation_rates:\n            padding = (kernel_size - 1) * dilation // 2\n            self.branches.append(\n                nn.Sequential(\n                    nn.Conv1d(in_channels, out_channels, kernel_size=kernel_size, \n                              padding=padding, dilation=dilation),\n                    nn.BatchNorm1d(out_channels),\n                    nn.GELU(),\n                    nn.Dropout(dropout)\n                )\n            )\n        # Residual projection if needed\n        if in_channels != out_channels:\n            self.residual_proj = nn.Conv1d(in_channels, out_channels, kernel_size=1)\n        else:\n            self.residual_proj = None\n        self.out_channels = out_channels\n        \n    def forward(self, x):\n        residual = x\n        out = 0\n        for branch in self.branches:\n            out = out + branch(x)\n        out = out / len(self.branches)\n        if self.residual_proj is not None:\n            residual = self.residual_proj(residual)\n        return F.gelu(out + residual)\n\n\nclass MultiHeadTemporalAttention(nn.Module):\n    \"\"\"\n    Multi-head temporal self-attention with residual and layer norm.\n    \"\"\"\n    def __init__(self, d_model, n_heads, dropout=0.1):\n        super(MultiHeadTemporalAttention, self).__init__()\n        assert d_model % n_heads == 0\n        self.d_model = d_model\n        self.n_heads = n_heads\n        self.head_dim = d_model // n_heads\n        self.scale = 1.0 / math.sqrt(self.head_dim)\n        \n        self.qkv = nn.Linear(d_model, d_model * 3)\n        self.proj = nn.Linear(d_model, d_model)\n        self.dropout = nn.Dropout(dropout)\n        self.norm = nn.LayerNorm(d_model)\n        \n    def forward(self, x, mask=None):\n        # x shape: [batch, length, d_model]\n        B, L, D = x.shape\n        residual = x\n        \n        # Compute Q, K, V\n        qkv = self.qkv(x).reshape(B, L, 3, self.n_heads, self.head_dim).permute(2, 0, 3, 1, 4)\n        q, k, v = qkv[0], qkv[1], qkv[2]  # each [B, n_heads, L, head_dim]\n        \n        # Attention scores\n        attn = torch.matmul(q, k.transpose(-2, -1)) * self.scale  # [B, n_heads, L, L]\n        if mask is not None:\n            # mask shape [B, L] -> [B, 1, 1, L] for broadcasting\n            mask = mask.unsqueeze(1).unsqueeze(2)\n            attn = attn.masked_fill(mask == 0, float('-inf'))\n        attn = F.softmax(attn, dim=-1)\n        attn = self.dropout(attn)\n        \n        # Weighted sum\n        out = torch.matmul(attn, v)  # [B, n_heads, L, head_dim]\n        out = out.transpose(1, 2).reshape(B, L, D)  # [B, L, D]\n        out = self.proj(out)\n        out = self.dropout(out)\n        out = self.norm(out + residual)\n        return out\n\n\nclass CrossChannelAttention(nn.Module):\n    \"\"\"\n    Attention across channels (variables) using linear projection.\n    \"\"\"\n    def __init__(self, d_model, reduction=4, dropout=0.1):\n        super(CrossChannelAttention, self).__init__()\n        self.d_model = d_model\n        self.reduction = reduction\n        self.avg_pool = nn.AdaptiveAvgPool1d(1)\n        \n        # Two-layer MLP for channel attention\n        self.mlp = nn.Sequential(\n            nn.Linear(d_model, d_model // reduction),\n            nn.GELU(),\n            nn.Dropout(dropout),\n            nn.Linear(d_model // reduction, d_model),\n            nn.Sigmoid()\n        )\n        \n    def forward(self, x):\n        # x shape: [batch, d_model, length]\n        B, C, L = x.shape\n        # Compute channel-wise statistics\n        y = self.avg_pool(x).squeeze(-1)  # [B, C]\n        y = self.mlp(y).unsqueeze(-1)  # [B, C, 1]\n        return x * y.expand_as(x)\n\n\nclass Model(nn.Module):\n    \"\"\"\n    Custom model for time series classification.\n    Uses dilated convolutions for multi-scale temporal patterns,\n    multi-head temporal attention, and cross-channel attention.\n    \"\"\"\n    def __init__(self, configs):\n        super(Model, self).__init__()\n        self.task_name = configs.task_name\n        self.seq_len = configs.seq_len\n        self.enc_in = configs.enc_in\n        self.num_class = configs.num_class\n        \n        # Use config parameters\n        d_model = configs.d_model\n        d_ff = configs.d_ff\n        n_heads = configs.n_heads\n        e_layers = configs.e_layers\n        dropout = configs.dropout\n        \n        # Input projection\n        self.input_proj = nn.Linear(self.enc_in, d_model)\n        \n        # Dilated convolutional layers\n        self.dilated_convs = nn.ModuleList()\n        for i in range(e_layers):\n            self.dilated_convs.append(\n                DilatedConvBlock(d_model, d_model, dilation_rates=[1, 2, 4, 8], \n                                 kernel_size=3, dropout=dropout)\n            )\n        \n        # Temporal multi-head attention\n        self.temp_attention = MultiHeadTemporalAttention(d_model, n_heads, dropout)\n        \n        # Cross-channel attention\n        self.channel_attention = CrossChannelAttention(d_model, reduction=4, dropout=dropout)\n        \n        # Adaptive pooling\n        self.adaptive_pool = nn.AdaptiveAvgPool1d(1)\n        \n        # Classification head\n        self.classifier = nn.Sequential(\n            nn.Linear(d_model, d_ff),\n            nn.GELU(),\n            nn.Dropout(dropout),\n            nn.Linear(d_ff, self.num_class)\n        )\n        \n    def classification(self, x_enc, x_mark_enc):\n        \"\"\"\n        Classification: assign a label to the input time series.\n        Input: x_enc [batch, seq_len, enc_in]\n        x_mark_enc: [batch, seq_len] padding mask\n        Output: [batch, num_class] logits\n        \"\"\"\n        batch_size = x_enc.shape[0]\n        \n        # Apply padding mask if provided\n        if x_mark_enc is not None:\n            mask = x_mark_enc.unsqueeze(-1)  # [batch, seq_len, 1]\n            x_enc = x_enc * mask\n        \n        # Project input [batch, seq_len, enc_in] -> [batch, seq_len, d_model]\n        x = self.input_proj(x_enc)\n        \n        # Transpose for conv layers: [batch, d_model, seq_len]\n        x = x.transpose(1, 2)\n        \n        # Apply dilated convolutional layers\n        for conv in self.dilated_convs:\n            x = conv(x)\n        \n        # Apply cross-channel attention\n        x = self.channel_attention(x)\n        \n        # Transpose back for temporal attention: [batch, seq_len, d_model]\n        x = x.transpose(1, 2)\n        \n        # Apply temporal attention with mask\n        attn_mask = x_mark_enc if x_mark_enc is not None else None\n        x = self.temp_attention(x, mask=attn_mask)\n        \n        # Apply padding mask again before pooling\n        if x_mark_enc is not None:\n            mask = x_mark_enc.unsqueeze(-1)  # [batch, seq_len, 1]\n            x = x * mask\n        \n        # Adaptive average pooling over time dimension\n        x = x.transpose(1, 2)  # [batch, d_model, seq_len]\n        x = self.adaptive_pool(x)  # [batch, d_model, 1]\n        x = x.squeeze(-1)  # [batch, d_model]\n        \n        # Classification\n        logits = self.classifier(x)\n        return logits\n\n    def forward(self, x_enc, x_mark_enc, x_dec, x_mark_dec, mask=None):\n        if self.task_name == 'classification':\n            dec_out = self.classification(x_enc, x_mark_enc)\n            return dec_out\n        return None"
7}
Tool ResultStep 3
OK: Replaced lines 1..190 with 216 line(s) in Time-Series-Library/models/Custom.py. Editable range: entire file.

[Current file: Time-Series-Library/models/Custom.py | editable: 1–216 | total: 216 lines]
     1  import torch
     2  import torch.nn as nn
     3  import torch.nn.functional as F
     4  import math
     5  
     6  
     7  class DilatedConvBlock(nn.Module):
     8      """
     9      Dilated convolutional block with multiple parallel dilation rates.
    10      Each branch: Conv1d with dilation, BatchNorm, GELU, Dropout.
    11      """
    12      def __init__(self, in_channels, out_channels, dilation_rates=[1, 2, 4, 8], kernel_size=3, dropout=0.1):
    13          super(DilatedConvBlock, self).__init__()
    14          self.branches = nn.ModuleList()
    15          for dilation in dilation_rates:
    16              padding = (kernel_size - 1) * dilation // 2
    17              self.branches.append(
    18                  nn.Sequential(
    19                    
AssistantStep 4test
Tool ResultStep 4
[Test #2] (1 test remaining; call submit(n=2) to submit this result)

### EthanolConcentration (scripts/ethanol.sh)
Training metrics (last epochs):
TRAIN_METRICS epoch=7 train_loss=1.352 vali_loss=1.387 vali_acc=0.243 test_acc=0.243
TRAIN_METRICS epoch=8 train_loss=1.356 vali_loss=1.393 vali_acc=0.274 test_acc=0.274
TRAIN_METRICS epoch=9 train_loss=1.338 vali_loss=1.401 vali_acc=0.278 test_acc=0.278
TRAIN_METRICS epoch=10 train_loss=1.355 vali_loss=1.411 vali_acc=0.259 test_acc=0.259
TRAIN_METRICS epoch=11 train_loss=1.342 vali_loss=1.405 vali_acc=0.270 test_acc=0.270
Test results (EthanolConcentration):
  Accuracy: 0.28137

### FaceDetection (scripts/facedetection.sh)
Training metrics (last epochs):
TRAIN_METRICS epoch=12 train_loss=0.132 vali_loss=1.652 vali_acc=0.591 test_acc=0.591
TRAIN_METRICS epoch=13 train_loss=0.106 vali_loss=1.463 vali_acc=0.568 test_acc=0.568
TRAIN_METRICS epoch=14 train_loss=0.101 vali_loss=1.898 vali_acc=0.573 test_acc=0.573
TRAIN_METRICS epoch=15 train_los
AssistantStep 5edit
Tool Input
1{
2  "op": "replace",
3  "filename": "Time-Series-Library/models/Custom.py",
4  "start_line": 1,
5  "end_line": 216,
6  "content": "import torch\nimport torch.nn as nn\nimport torch.nn.functional as F\nimport math\nimport torch.fft\n\n\nclass FrequencyAttention(nn.Module):\n    \"\"\"\n    Frequency-domain attention: FFT -> learnable weighting -> inverse FFT.\n    \"\"\"\n    def __init__(self, d_model, seq_len, dropout=0.1):\n        super(FrequencyAttention, self).__init__()\n        self.d_model = d_model\n        self.seq_len = seq_len\n        # Number of frequency bins (real FFT)\n        self.n_freq = seq_len // 2 + 1\n        \n        # Learnable weight for each frequency bin\n        self.freq_weight = nn.Parameter(torch.ones(1, d_model, self.n_freq))\n        self.dropout = nn.Dropout(dropout)\n        \n    def forward(self, x):\n        # x shape: [batch, d_model, seq_len]\n        B, C, L = x.shape\n        # Apply FFT along the time dimension\n        x_freq = torch.fft.rfft(x, dim=-1)  # [B, C, n_freq] complex\n        \n        # Separate magnitude and phase\n        mag = torch.abs(x_freq)\n        phase = torch.angle(x_freq)\n        \n        # Learnable scaling of magnitude\n        weight = self.freq_weight  # [1, C, n_freq]\n        mag = mag * weight\n        \n        # Reconstruct complex numbers\n        real = mag * torch.cos(phase)\n        imag = mag * torch.sin(phase)\n        x_freq_weighted = torch.complex(real, imag)\n        \n        # Inverse FFT\n        x_time = torch.fft.irfft(x_freq_weighted, n=L, dim=-1)  # [B, C, L]\n        \n        # Residual connection\n        out = x + self.dropout(x_time)\n        return out\n\n\nclass DilatedConvBlock(nn.Module):\n    \"\"\"\n    Dilated convolutional block with multiple parallel dilation rates.\n    Each branch: Conv1d with dilation, BatchNorm, GELU, Dropout.\n    \"\"\"\n    def __init__(self, in_channels, out_channels, dilation_rates=[1, 2, 4, 8], kernel_size=3, dropout=0.1):\n        super(DilatedConvBlock, self).__init__()\n        self.branches = nn.ModuleList()\n        for dilation in dilation_rates:\n            padding = (kernel_size - 1) * dilation // 2\n            self.branches.append(\n                nn.Sequential(\n                    nn.Conv1d(in_channels, out_channels, kernel_size=kernel_size, \n                              padding=padding, dilation=dilation),\n                    nn.BatchNorm1d(out_channels),\n                    nn.GELU(),\n                    nn.Dropout(dropout)\n                )\n            )\n        # Residual projection if needed\n        if in_channels != out_channels:\n            self.residual_proj = nn.Conv1d(in_channels, out_channels, kernel_size=1)\n        else:\n            self.residual_proj = None\n        self.out_channels = out_channels\n        \n    def forward(self, x):\n        residual = x\n        out = 0\n        for branch in self.branches:\n            out = out + branch(x)\n        out = out / len(self.branches)\n        if self.residual_proj is not None:\n            residual = self.residual_proj(residual)\n        return F.gelu(out + residual)\n\n\nclass MultiHeadTemporalAttention(nn.Module):\n    \"\"\"\n    Multi-head temporal self-attention with residual and layer norm.\n    \"\"\"\n    def __init__(self, d_model, n_heads, dropout=0.1):\n        super(MultiHeadTemporalAttention, self).__init__()\n        assert d_model % n_heads == 0\n        self.d_model = d_model\n        self.n_heads = n_heads\n        self.head_dim = d_model // n_heads\n        self.scale = 1.0 / math.sqrt(self.head_dim)\n        \n        self.qkv = nn.Linear(d_model, d_model * 3)\n        self.proj = nn.Linear(d_model, d_model)\n        self.dropout = nn.Dropout(dropout)\n        self.norm = nn.LayerNorm(d_model)\n        \n    def forward(self, x, mask=None):\n        # x shape: [batch, length, d_model]\n        B, L, D = x.shape\n        residual = x\n        \n        # Compute Q, K, V\n        qkv = self.qkv(x).reshape(B, L, 3, self.n_heads, self.head_dim).permute(2, 0, 3, 1, 4)\n        q, k, v = qkv[0], qkv[1], qkv[2]  # each [B, n_heads, L, head_dim]\n        \n        # Attention scores\n        attn = torch.matmul(q, k.transpose(-2, -1)) * self.scale  # [B, n_heads, L, L]\n        if mask is not None:\n            # mask shape [B, L] -> [B, 1, 1, L] for broadcasting\n            mask = mask.unsqueeze(1).unsqueeze(2)\n            attn = attn.masked_fill(mask == 0, float('-inf'))\n        attn = F.softmax(attn, dim=-1)\n        attn = self.dropout(attn)\n        \n        # Weighted sum\n        out = torch.matmul(attn, v)  # [B, n_heads, L, head_dim]\n        out = out.transpose(1, 2).reshape(B, L, D)  # [B, L, D]\n        out = self.proj(out)\n        out = self.dropout(out)\n        out = self.norm(out + residual)\n        return out\n\n\nclass CrossChannelAttention(nn.Module):\n    \"\"\"\n    Attention across channels (variables) using linear projection.\n    \"\"\"\n    def __init__(self, d_model, reduction=4, dropout=0.1):\n        super(CrossChannelAttention, self).__init__()\n        self.d_model = d_model\n        self.reduction = reduction\n        self.avg_pool = nn.AdaptiveAvgPool1d(1)\n        \n        # Two-layer MLP for channel attention\n        self.mlp = nn.Sequential(\n            nn.Linear(d_model, d_model // reduction),\n            nn.GELU(),\n            nn.Dropout(dropout),\n            nn.Linear(d_model // reduction, d_model),\n            nn.Sigmoid()\n        )\n        \n    def forward(self, x):\n        # x shape: [batch, d_model, length]\n        B, C, L = x.shape\n        # Compute channel-wise statistics\n        y = self.avg_pool(x).squeeze(-1)  # [B, C]\n        y = self.mlp(y).unsqueeze(-1)  # [B, C, 1]\n        return x * y.expand_as(x)\n\n\nclass Model(nn.Module):\n    \"\"\"\n    Custom model for time series classification.\n    Combines frequency-domain attention, dilated convolutions for multi-scale temporal patterns,\n    multi-head temporal attention, and cross-channel attention.\n    \"\"\"\n    def __init__(self, configs):\n        super(Model, self).__init__()\n        self.task_name = configs.task_name\n        self.seq_len = configs.seq_len\n        self.enc_in = configs.enc_in\n        self.num_class = configs.num_class\n        \n        # Use config parameters\n        d_model = configs.d_model\n        d_ff = configs.d_ff\n        n_heads = configs.n_heads\n        e_layers = configs.e_layers\n        dropout = configs.dropout\n        \n        # Input projection\n        self.input_proj = nn.Linear(self.enc_in, d_model)\n        \n        # Frequency attention branch\n        self.freq_attention = FrequencyAttention(d_model, self.seq_len, dropout)\n        \n        # Dilated convolutional layers\n        self.dilated_convs = nn.ModuleList()\n        for i in range(e_layers):\n            self.dilated_convs.append(\n                DilatedConvBlock(d_model, d_model, dilation_rates=[1, 2, 4, 8], \n                                 kernel_size=3, dropout=dropout)\n            )\n        \n        # Temporal multi-head attention\n        self.temp_attention = MultiHeadTemporalAttention(d_model, n_heads, dropout)\n        \n        # Cross-channel attention\n        self.channel_attention = CrossChannelAttention(d_model, reduction=4, dropout=dropout)\n        \n        # Adaptive pooling\n        self.adaptive_pool = nn.AdaptiveAvgPool1d(1)\n        \n        # Classification head\n        self.classifier = nn.Sequential(\n            nn.Linear(d_model, d_ff),\n            nn.GELU(),\n            nn.Dropout(dropout),\n            nn.Linear(d_ff, self.num_class)\n        )\n        \n    def classification(self, x_enc, x_mark_enc):\n        \"\"\"\n        Classification: assign a label to the input time series.\n        Input: x_enc [batch, seq_len, enc_in]\n        x_mark_enc: [batch, seq_len] padding mask\n        Output: [batch, num_class] logits\n        \"\"\"\n        batch_size = x_enc.shape[0]\n        \n        # Apply padding mask if provided\n        if x_mark_enc is not None:\n            mask = x_mark_enc.unsqueeze(-1)  # [batch, seq_len, 1]\n            x_enc = x_enc * mask\n        \n        # Project input [batch, seq_len, enc_in] -> [batch, seq_len, d_model]\n        x = self.input_proj(x_enc)\n        \n        # Transpose for conv layers: [batch, d_model, seq_len]\n        x = x.transpose(1, 2)\n        \n        # Apply frequency attention\n        x = self.freq_attention(x)\n        \n        # Apply dilated convolutional layers\n        for conv in self.dilated_convs:\n            x = conv(x)\n        \n        # Apply cross-channel attention\n        x = self.channel_attention(x)\n        \n        # Transpose back for temporal attention: [batch, seq_len, d_model]\n        x = x.transpose(1, 2)\n        \n        # Apply temporal attention with mask\n        attn_mask = x_mark_enc if x_mark_enc is not None else None\n        x = self.temp_attention(x, mask=attn_mask)\n        \n        # Apply padding mask again before pooling\n        if x_mark_enc is not None:\n            mask = x_mark_enc.unsqueeze(-1)  # [batch, seq_len, 1]\n            x = x * mask\n        \n        # Adaptive average pooling over time dimension\n        x = x.transpose(1, 2)  # [batch, d_model, seq_len]\n        x = self.adaptive_pool(x)  # [batch, d_model, 1]\n        x = x.squeeze(-1)  # [batch, d_model]\n        \n        # Classification\n        logits = self.classifier(x)\n        return logits\n\n    def forward(self, x_enc, x_mark_enc, x_dec, x_mark_dec, mask=None):\n        if self.task_name == 'classification':\n            dec_out = self.classification(x_enc, x_mark_enc)\n            return dec_out\n        return None"
7}
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OK: Replaced lines 1..216 with 265 line(s) in Time-Series-Library/models/Custom.py. Editable range: entire file.

[Current file: Time-Series-Library/models/Custom.py | editable: 1–265 | total: 265 lines]
     1  import torch
     2  import torch.nn as nn
     3  import torch.nn.functional as F
     4  import math
     5  import torch.fft
     6  
     7  
     8  class FrequencyAttention(nn.Module):
     9      """
    10      Frequency-domain attention: FFT -> learnable weighting -> inverse FFT.
    11      """
    12      def __init__(self, d_model, seq_len, dropout=0.1):
    13          super(FrequencyAttention, self).__init__()
    14          self.d_model = d_model
    15          self.seq_len = seq_len
    16          # Number of frequency bins (real FFT)
    17          self.n_freq = seq_len // 2 + 1
    18          
    19          # Learnable weight for each frequency bin
    20          self.freq_weight = nn.Parameter(torch.ones(1, d_model, self.n_freq))
    21          self.
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[Test #3] (0 tests remaining)


## Seed 42

### EthanolConcentration (scripts/ethanol.sh)
Training metrics (last epochs):
TRAIN_METRICS epoch=28 train_loss=1.275 vali_loss=1.459 vali_acc=0.259 test_acc=0.259
TRAIN_METRICS epoch=29 train_loss=1.260 vali_loss=1.493 vali_acc=0.224 test_acc=0.224
TRAIN_METRICS epoch=30 train_loss=1.259 vali_loss=1.538 vali_acc=0.281 test_acc=0.281
TRAIN_METRICS epoch=31 train_loss=1.293 vali_loss=1.486 vali_acc=0.243 test_acc=0.243
TRAIN_METRICS epoch=32 train_loss=1.250 vali_loss=1.479 vali_acc=0.274 test_acc=0.274
Test results (EthanolConcentration):
  Accuracy: 0.29658

### FaceDetection (scripts/facedetection.sh)
Training metrics (last epochs):
TRAIN_METRICS epoch=18 train_loss=0.071 vali_loss=2.369 vali_acc=0.565 test_acc=0.565
TRAIN_METRICS epoch=19 train_loss=0.067 vali_loss=2.298 vali_acc=0.581 test_acc=0.581
TRAIN_METRICS epoch=20 train_loss=0.072 vali_loss=2.513 vali_acc=0.575 test_acc=0.575
TRAIN_METRICS epoch=21 train_loss=0.076 vali_loss=1.620