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Model: google/gemini-3.1-pro-preview
Total steps: 6
Messages: 16
UserStep 0

Task: optimization-pac-bayes-bound

Task: PAC-Bayes Generalization Bound Optimization

Research Question

Design a tighter PAC-Bayes generalization bound by optimizing the bound formulation, prior/posterior parameterization, and KL divergence estimation for stochastic neural networks.

Background

PAC-Bayes theory provides non-vacuous generalization bounds for stochastic classifiers. Given a prior distribution P over hypotheses (chosen before seeing data) and a posterior Q (learned from data), PAC-Bayes bounds certify that with high probability (1-delta), the true risk of a stochastic classifier sampled from Q is bounded.

The key components of a PAC-Bayes bound are:

  • Empirical risk: estimated loss of the stochastic predictor on training data
  • KL divergence: KL(Q||P) measuring complexity of the posterior relative to the prior
  • Bound formula: how these terms combine to yield the final certificate

Standard bounds include:

  • McAllester/Maurer: risk + sqrt(KL_term / (2n)) -- simple but loose
  • Catoni/Lambda: risk/(1-lam/2) + KL_term/(nlam(1-lam/2)) -- tighter with tuned lambda
  • Quadratic: (sqrt(risk + KL_term) + sqrt(KL_term))^2 -- better at low risk

The bound can be further tightened through:

  • Optimizing the bound functional form (beyond classical inequalities)
  • Better training objectives that minimize the bound directly
  • Improved risk certificate evaluation (e.g., PAC-Bayes-kl inversion)
  • Data-dependent prior construction
  • Tighter KL estimation or alternative divergence measures

What to Implement

Implement the BoundOptimizer class in custom_pac_bayes.py. You must implement:

  1. compute_bound(empirical_risk, kl, n, delta): The PAC-Bayes bound formula
  2. train_step(model, data, target, device, n_bound, delta): Training objective
  3. compute_risk_certificate(model, bound_loader, device, delta, mc_samples): Final certificate evaluation

Interface

  • model(x, sample=True/False): stochastic forward pass (sample=True) or posterior mean (sample=False)
  • get_total_kl(model): sum of KL divergence across all probabilistic layers
  • inv_kl(q, c): binary KL inversion -- find p such that KL(Ber(q)||Ber(p)) = c
  • compute_01_risk(model, loader, device, mc_samples): MC estimate of 0-1 risk
  • Available losses: F.nll_loss, F.cross_entropy on log_softmax outputs

Evaluation

The bound optimizer is tested on three settings:

  1. MNIST-FCN: 4-layer fully connected network (784-600-600-600-10) on MNIST
  2. MNIST-CNN: 4-layer CNN (2 conv + 2 fc) on MNIST
  3. FashionMNIST-CNN: Same CNN architecture on FashionMNIST

Primary metric: risk_certificate (0-1 loss PAC-Bayes bound) -- lower is better (tighter bound).

Training uses data-dependent priors: 50% of training data trains a deterministic prior, 50% evaluates the bound.

Hints

  • The PAC-Bayes-kl bound (Langford-Seeger) is often tighter than closed-form alternatives for certificate evaluation
  • The training objective need not be the sa
AssistantStep 1edit
Tool Input
1{
2  "after_line": 1,
3  "start_line": 460,
4  "filename": "PBB/custom_pac_bayes.py",
5  "content": "class BoundOptimizer:\n    \"\"\"PAC-Bayes bound computation and posterior optimization.\n    \n    Uses an Optimal-Catoni bound analytically evaluated over Lambda,\n    and implements data-dependent prior variance search via a valid PAC-Bayes union bound!\n    \"\"\"\n\n    def __init__(self, learning_rate=0.001, momentum=0.95, prior_sigma=0.03, pmin=1e-5):\n        self.learning_rate = learning_rate\n        self.momentum = momentum\n        self.prior_sigma = prior_sigma\n        self.pmin = pmin\n        self.log_p_sigma = None\n        self.ps_opt = None\n\n    def compute_bound(self, empirical_risk, kl, n, delta):\n        # Optimal analytical Lambda for Catoni PAC-Bayes bound\n        c = (kl + math.log(2.0 * math.sqrt(n) / delta)) / n\n        q = empirical_risk\n        \n        c_p = torch.clamp(c, min=1e-8)\n        q_p = torch.clamp(q, min=1e-8)\n        \n        # Exact optimum of: min_{\\lambda} (q + c/\\lambda) / (1 - \\lambda/2)\n        R = torch.sqrt(c_p**2 + 2.0 * q_p * c_p)\n        bound = ((2.0 * q_p + c_p + R) ** 2) / (4.0 * q_p + 2.0 * c_p)\n        return bound\n\n    def train_step(self, model, data, target, device, n_bound, delta):\n        prob_modules = [m for m in model.modules() if hasattr(m, 'prior_sigma')]\n        M = len(prob_modules)\n        \n        if self.log_p_sigma is None:\n            init_val = math.log(self.prior_sigma)\n            self.log_p_sigma = torch.tensor([init_val] * M, device=device, requires_grad=True)\n            self.ps_opt = torch.optim.Adam([self.log_p_sigma], lr=0.01)\n\n        if self.log_p_sigma.grad is not None:\n            self.ps_opt.step()\n            self.ps_opt.zero_grad()\n            \n        with torch.no_grad():\n            self.log_p_sigma.clamp_(math.log(0.0001), math.log(2.0))\n            \n        ps_vals = torch.exp(self.log_p_sigma)\n\n        # Continously learn the per-layer prior sigmas anticipating the future union bound validation\n        for i, m in enumerate(prob_modules):\n            m.prior_sigma = ps_vals[i]\n\n        output = model(data, sample=True)\n        log_probs = F.log_softmax(output, dim=1)\n        log_probs = torch.clamp(log_probs, min=math.log(self.pmin))\n        nll = F.nll_loss(log_probs, target)\n\n        kl = get_total_kl(model)\n        \n        K_layer = 1000\n        K_total = float(K_layer) ** M\n        bound = self.compute_bound(nll, kl, n_bound, delta / K_total)\n        return bound\n\n    def compute_risk_certificate(self, model, bound_loader, device, delta=0.025, mc_samples=1000):\n        model.eval()\n        n_bound = len(bound_loader.dataset)\n\n        emp_risk_01 = compute_01_risk(model, bound_loader, device, mc_samples=mc_samples)\n\n        total_nll = 0.0\n        total_samples = 0\n        with torch.no_grad():\n            for data, target in bound_loader:\n                data, target = data.to(device), target.to(device)\n                output = model(data, sample=True)\n                log_probs = F.log_softmax(output, dim=1)\n                log_probs = torch.clamp(log_probs, min=math.log(self.pmin))\n                nll = F.nll_loss(log_probs, target, reduction=\"sum\")\n                total_nll += nll.item()\n                total_samples += target.size(0)\n        emp_nll = total_nll / total_samples\n\n        # Grid Search for optimal prior_sigma per layer with valid union bound\n        prob_modules = [m for m in model.modules() if hasattr(m, 'weight_mu')]\n        M = len(prob_modules)\n        K_layer = 1000\n        sigmas = torch.logspace(-4, 0, K_layer).to(device)\n        K_total = float(K_layer) ** M\n        union_delta = delta / K_total\n        \n        best_kl = 0.0\n        for m in prob_modules:\n            best_m_kl = float('inf')\n            best_m_sigma = None\n            \n            q_sigma_w = torch.log1p(torch.exp(m.weight_rho)).detach()\n            w_diff_sq = (m.weight_mu.detach() - m.weight_prior_mu.detach()) ** 2\n            \n            q_sigma_b = torch.log1p(torch.exp(m.bias_rho)).detach()\n            b_diff_sq = (m.bias_mu.detach() - m.bias_prior_mu.detach()) ** 2\n            \n            w_log_q = torch.log(q_sigma_w)\n            b_log_q = torch.log(q_sigma_b)\n            \n            for p_sig in sigmas:\n                p_var = p_sig.item() ** 2\n                log_p_var = math.log(p_var)\n                \n                kl_w = 0.5 * (\n                    (q_sigma_w ** 2 + w_diff_sq) / p_var\n                    - 1.0 + log_p_var - 2.0 * w_log_q\n                ).sum()\n                \n                kl_b = 0.5 * (\n                    (q_sigma_b ** 2 + b_diff_sq) / p_var\n                    - 1.0 + log_p_var - 2.0 * b_log_q\n                ).sum()\n                \n                m_kl = (kl_w + kl_b).item()\n                if m_kl < best_m_kl:\n                    best_m_kl = m_kl\n                    best_m_sigma = p_sig.item()\n                    \n            m.prior_sigma = best_m_sigma\n            best_kl += best_m_kl\n\n        with torch.no_grad():\n            dummy_data = next(iter(bound_loader))[0][:1].to(device)\n            model(dummy_data, sample=True)\n\n        c = (best_kl + math.log(2.0 * math.sqrt(n_bound) / union_delta)) / n_bound\n        risk_cert_01 = inv_kl(emp_risk_01, c)\n\n        emp_nll_t = torch.tensor(emp_nll)\n        kl_t = torch.tensor(best_kl)\n        ce_bound = self.compute_bound(emp_nll_t, kl_t, n_bound, union_delta).item()\n\n        metrics = {\n            \"empirical_01_risk\": emp_risk_01,\n            \"empirical_nll\": emp_nll,\n            \"kl_divergence\": best_kl,\n            \"ce_bound\": ce_bound,\n        }\n\n        return risk_cert_01, metrics",
6  "end_line": 604,
7  "op": "replace"
8}
Tool ResultStep 1
OK: Replaced lines 460..604 with 144 line(s) in PBB/custom_pac_bayes.py. Editable range: 460–603.

[Current file: PBB/custom_pac_bayes.py | editable: 460–603 | total: 793 lines]
   457| # ================================================================
   458| 
   459| 
   460  class BoundOptimizer:
   461      """PAC-Bayes bound computation and posterior optimization.
   462      
   463      Uses an Optimal-Catoni bound analytically evaluated over Lambda,
   464      and implements data-dependent prior variance search via a valid PAC-Bayes union bound!
   465      """
   466  
   467      def __init__(self, learning_rate=0.001, momentum=0.95, prior_sigma=0.03, pmin=1e-5):
   468          self.learning_rate = learning_rate
   469          self.momentum = momentum
   470          self.prior_sigma = prior_sigma
   471          self.pmin = pmin
   472          self.log_p_sigma = None
   473          self.ps_opt = None
   474  
   475      def compute_bound(self, empirical_risk, kl, n, de
AssistantStep 2test
AssistantStep 1edit
Tool Input
1{
2  "after_line": 459,
3  "end_line": 604,
4  "content": "class DiffInvKL(torch.autograd.Function):\n    @staticmethod\n    def forward(ctx, q, c):\n        q_val = min(max(q.item(), 1e-7), 1.0 - 1e-7)\n        c_val = max(c.item(), 0.0)\n        p_val = inv_kl(q_val, c_val)\n        p_t = torch.tensor(p_val, device=q.device, dtype=q.dtype)\n        ctx.save_for_backward(q, c, p_t)\n        return p_t\n\n    @staticmethod\n    def backward(ctx, grad_output):\n        q, c, p = ctx.saved_tensors\n        q_val = torch.clamp(q, min=1e-7, max=1.0 - 1e-7)\n        p_val = torch.clamp(p, min=q_val + 1e-6, max=1.0 - 1e-7)\n\n        dp_dc = (p_val * (1.0 - p_val)) / (p_val - q_val + 1e-9)\n        dkl_dq = torch.log((q_val * (1.0 - p_val)) / (p_val * (1.0 - q_val)))\n        dp_dq = -dkl_dq * dp_dc\n\n        return grad_output * dp_dq, grad_output * dp_dc\n\nclass BoundOptimizer:\n    def __init__(self, learning_rate=0.001, momentum=0.95, prior_sigma=0.1, pmin=1e-5):\n        self.learning_rate = learning_rate\n        self.momentum = momentum\n        self.prior_sigma = prior_sigma\n        self.pmin = pmin\n\n    def compute_bound(self, empirical_risk, kl, n, delta):\n        c = (kl + math.log(2.0 * math.sqrt(n) / delta)) / n\n        q = torch.clamp(empirical_risk, min=1e-7, max=0.999)\n        return DiffInvKL.apply(q, c)\n\n    def train_step(self, model, data, target, device, n_bound, delta):\n        M = 2\n        emp_risk = 0.0\n        for _ in range(M):\n            output = model(data, sample=True)\n            probs = F.softmax(output, dim=1)\n            p_correct = probs.gather(1, target.unsqueeze(1)).squeeze(1)\n            emp_risk = emp_risk + (1.0 - p_correct).mean()\n        \n        emp_risk = emp_risk / M\n        kl = get_total_kl(model)\n        return self.compute_bound(emp_risk, kl, n_bound, delta)\n\n    def compute_risk_certificate(self, model, bound_loader, device, delta=0.025, mc_samples=1000):\n        model.eval()\n        n_bound = len(bound_loader.dataset)\n\n        emp_risk_01 = compute_01_risk(model, bound_loader, device, mc_samples=mc_samples)\n\n        total_nll = 0.0\n        total_samples = 0\n        kl_total = None\n        with torch.no_grad():\n            for data, target in bound_loader:\n                data, target = data.to(device), target.to(device)\n                output = model(data, sample=True)\n                log_probs = F.log_softmax(output, dim=1)\n                log_probs = torch.clamp(log_probs, min=math.log(self.pmin))\n                nll = F.nll_loss(log_probs, target, reduction=\"sum\")\n                total_nll += nll.item()\n                total_samples += target.size(0)\n                if kl_total is None:\n                    kl_total = get_total_kl(model)\n\n        emp_nll = total_nll / total_samples\n\n        with torch.no_grad():\n            dummy_data = next(iter(bound_loader))[0][:1].to(device)\n            model(dummy_data, sample=True)\n            kl = get_total_kl(model).item()\n\n        c = (kl + math.log(2.0 * math.sqrt(n_bound) / delta)) / n_bound\n        risk_cert_01 = inv_kl(emp_risk_01, c)\n\n        emp_nll_t = torch.tensor(emp_nll, device=device)\n        kl_t = torch.tensor(kl, device=device)\n        ce_bound = self.compute_bound(emp_nll_t, kl_t, n_bound, delta).item()\n\n        metrics = {\n            \"empirical_01_risk\": emp_risk_01,\n            \"empirical_nll\": emp_nll,\n            \"kl_divergence\": kl,\n            \"ce_bound\": ce_bound,\n        }\n\n        return risk_cert_01, metrics\n",
5  "filename": "PBB/custom_pac_bayes.py",
6  "op": "replace",
7  "start_line": 460
8}
Tool ResultStep 1
OK: Replaced lines 460..604 with 90 line(s) in PBB/custom_pac_bayes.py. Editable range: 460–549.

[Current file: PBB/custom_pac_bayes.py | editable: 460–549 | total: 739 lines]
   457| # ================================================================
   458| 
   459| 
   460  class DiffInvKL(torch.autograd.Function):
   461      @staticmethod
   462      def forward(ctx, q, c):
   463          q_val = min(max(q.item(), 1e-7), 1.0 - 1e-7)
   464          c_val = max(c.item(), 0.0)
   465          p_val = inv_kl(q_val, c_val)
   466          p_t = torch.tensor(p_val, device=q.device, dtype=q.dtype)
   467          ctx.save_for_backward(q, c, p_t)
   468          return p_t
   469  
   470      @staticmethod
   471      def backward(ctx, grad_output):
   472          q, c, p = ctx.saved_tensors
   473          q_val = torch.clamp(q, min=1e-7, max=1.0 - 1e-7)
   474          p_val = torch.clamp(p, min=q_val + 1e-6, max=1.0 - 1e-7)
   475  
   476          dp_dc = (p_val * (1.0 - p_val)) /
AssistantStep 2test
Tool ResultStep 2
[Test #1] (2 tests remaining; call submit(n=1) to submit this result)

### mnist-fcn (scripts/mnist_fcn.sh)
Training progress (last 5 steps):
TRAIN_METRICS prior_epoch=10 loss=0.010002 accuracy=0.9971
TRAIN_METRICS posterior_epoch=5 train_obj=0.047469 kl=8.87
TRAIN_METRICS posterior_epoch=10 train_obj=0.047776 kl=10.06
TRAIN_METRICS posterior_epoch=15 train_obj=0.046266 kl=10.33
TRAIN_METRICS posterior_epoch=20 train_obj=0.047166 kl=9.23
Results (mnist-fcn):
  risk_certificate: 0.032692
  test_error: 0.024900
  kl_divergence: 9.230000
  ce_bound: 0.171025
  empirical_01_risk: 0.026600

### mnist-cnn (scripts/mnist_cnn.sh)
Training progress (last 5 steps):
TRAIN_METRICS prior_epoch=10 loss=0.004733 accuracy=0.9990
TRAIN_METRICS posterior_epoch=5 train_obj=0.021482 kl=5.20
TRAIN_METRICS posterior_epoch=10 train_obj=0.021898 kl=6.04
TRAIN_METRICS posterior_epoch=15 train_obj=0.021326 kl=5.79
TRAIN_METRICS posterior_epoch=20 train_obj=0.021561 kl=6.01
Results (mnist-cnn):
  risk_certificat
AssistantStep 3edit
Tool Input
1{
2  "end_line": 495,
3  "filename": "PBB/custom_pac_bayes.py",
4  "content": "        M = 4",
5  "after_line": 494,
6  "start_line": 495,
7  "op": "replace"
8}
Tool ResultStep 3
OK: Replaced lines 495..495 with 1 line(s) in PBB/custom_pac_bayes.py. Editable range: 460–549.

[Current file: PBB/custom_pac_bayes.py | editable: 460–549 | total: 739 lines]
   457| # ================================================================
   458| 
   459| 
   460  class DiffInvKL(torch.autograd.Function):
   461      @staticmethod
   462      def forward(ctx, q, c):
   463          q_val = min(max(q.item(), 1e-7), 1.0 - 1e-7)
   464          c_val = max(c.item(), 0.0)
   465          p_val = inv_kl(q_val, c_val)
   466          p_t = torch.tensor(p_val, device=q.device, dtype=q.dtype)
   467          ctx.save_for_backward(q, c, p_t)
   468          return p_t
   469  
   470      @staticmethod
   471      def backward(ctx, grad_output):
   472          q, c, p = ctx.saved_tensors
   473          q_val = torch.clamp(q, min=1e-7, max=1.0 - 1e-7)
   474          p_val = torch.clamp(p, min=q_val + 1e-6, max=1.0 - 1e-7)
   475  
   476          dp_dc = (p_val * (1.0 - p_val)) / 
AssistantStep 4test
Tool ResultStep 4
[Test #2] (1 test remaining; call submit(n=2) to submit this result)

### mnist-fcn (scripts/mnist_fcn.sh)
[output file not found: /srv/home/bohanlyu/MLS-Bench/logs/optimization-pac-bayes-bound/google_gemini-3.1-pro-preview_20260405_234104/20260406_010831/group_1/mnist-fcn_s42.out]

### mnist-cnn (scripts/mnist_cnn.sh)
[output file not found: /srv/home/bohanlyu/MLS-Bench/logs/optimization-pac-bayes-bound/google_gemini-3.1-pro-preview_20260405_234104/20260406_010831/group_1/mnist-cnn_s42.out]

### fmnist-cnn (scripts/fmnist_cnn.sh)
[output file not found: /srv/home/bohanlyu/MLS-Bench/logs/optimization-pac-bayes-bound/google_gemini-3.1-pro-preview_20260405_234104/20260406_010831/group_1/fmnist-cnn_s42.out]
AssistantStep 5undo
Tool ResultStep 5
Undo complete:
Restored: PBB/custom_pac_bayes.py
AssistantStep 6submit
Tool Input
1{
2  "n": 1
3}
Tool ResultStep 6
[submit] Submitting result from test #1 as final.

### mnist-fcn (scripts/mnist_fcn.sh)
Training progress (last 5 steps):
TRAIN_METRICS prior_epoch=10 loss=0.010002 accuracy=0.9971
TRAIN_METRICS posterior_epoch=5 train_obj=0.047469 kl=8.87
TRAIN_METRICS posterior_epoch=10 train_obj=0.047776 kl=10.06
TRAIN_METRICS posterior_epoch=15 train_obj=0.046266 kl=10.33
TRAIN_METRICS posterior_epoch=20 train_obj=0.047166 kl=9.23
Results (mnist-fcn):
  risk_certificate: 0.032692
  test_error: 0.024900
  kl_divergence: 9.230000
  ce_bound: 0.171025
  empirical_01_risk: 0.026600

### mnist-cnn (scripts/mnist_cnn.sh)
Training progress (last 5 steps):
TRAIN_METRICS prior_epoch=10 loss=0.004733 accuracy=0.9990
TRAIN_METRICS posterior_epoch=5 train_obj=0.021482 kl=5.20
TRAIN_METRICS posterior_epoch=10 train_obj=0.021898 kl=6.04
TRAIN_METRICS posterior_epoch=15 train_obj=0.021326 kl=5.79
TRAIN_METRICS posterior_epoch=20 train_obj=0.021561 kl=6.01
Results (mnist-cnn):
  risk_certificate: 0.015583
  test_e